Publication alert! IALH Research Fellow Hosna Jabbari has co-authored a new research article entitled A QUBO model of the RNA folding problem optimized by variational hybrid quantum annealing. Collaborating authors include Tristan Zaborniak, Januan Giraldo, Hausi Müller, and Ulrike Stege. The article was published in IEEE Xplore. Abstract: RNAs self-interact through hydrogen-bond base-pairing between nucleotides …
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A QUBO model of the RNA folding problem optimized by variational hybrid quantum annealing
Publication Alert! IALH Research Fellow Hosna Jabbari has co-authored a new research article entitled A QUBO model of the RNA folding problem optimized by variational hybrid quantum annealing. Other authors include Tristan Zaborniak, Juan Giraldo, Hausi Müller, and Ulrike Stege, all from the University of Victoria. Abstract: RNAs self-interact through hydrogen-bond basepairing between nucleotides and …
Supervised Promoter Recognition: A Benchmark Framework
Publication Alert! IALH Research Fellow Hosna Jabbari and IALH Student Affiliate Alison Ziesel have co-authored a new research article entitled Supervised promoter recognition: a benchmark framework. Other authors include Raul I. Perez Martell and Ulrike Stege. The article was published in BMC Bioinformatics. Abstract: Motivation: Deep learning has become a prevalent method in identifying genomic …
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Shapify: Pathways to SARS-CoV-2 Frameshifting Pseudoknot
Publication Alert! IALH Research Fellow Hosna Jabbari has co-authored an article with Luke Trinity, Ian Wark, Lance Lansing and Ulrike Stege entitled “Shapify: Pathways to SARS-CoV-2 Frameshifting Pseudoknot”. The article was published with Research Square. Abstract: Background: Multiple viruses including HIV, MERS-CoV (coronavirus responsible for Middle East Respiratory Syndrome, MERS), SARS-CoV (coronavirus responsible for SARS) …
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Identification of conserved and evolving RNA secondary structures in SARS-CoV-2 and related viruses
Publication Alert! IALH Faculty Affiliate Hosna Jabbari (Computer Science) has published an article with IALH Student Affiliate Alison Ziesel entitled “Identification of conserved and evolving RNA secondary structures in SARS-CoV-2 and related viruses” for CASCON ’21: Proceedings of the 31st Annual International Conference on Computer Science and Software Engineering. Abstract: RNA viruses encode not only …